Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs61845339 | chr10:43514457 | T/C | 4.2E-5 | 288 | 25.63 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61845340 | chr10:43514551 | T/C | 4.3E-5 | 289 | 25.67 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61845341 | chr10:43515482 | G/T | 2.11E-5 | 286 | 25.67 | 26.4 | 11.43 | KM Plot |
| KIRP | rs61845342 | chr10:43516848 | G/A | 4.3E-5 | 289 | 25.67 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61845343 | chr10:43517576 | T/G | 4.3E-5 | 289 | 25.67 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61845344 | chr10:43517800 | A/G | 1.63E-5 | 288 | 25.7 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61845345 | chr10:43518344 | C/T | 4.3E-5 | 289 | 25.67 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61845346 | chr10:43518400 | A/G | 4.3E-5 | 289 | 25.67 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61869171 | chr10:97766130 | T/C | 0 | 281 | 24.8 | 28.07 | 6.7 | KM Plot |
| KIRP | rs61896120 | chr11:47071900 | G/A | 7.93E-12 | 288 | 25.57 | 28.03 | 10.82 | KM Plot |
| KIRP | rs61896121 | chr11:47081470 | C/T | 9.01E-12 | 287 | 25.57 | 29.8 | 10.82 | KM Plot |
| KIRP | rs61896122 | chr11:47084871 | A/T | 9.01E-12 | 287 | 25.57 | 29.8 | 10.82 | KM Plot |
| KIRP | rs61896124 | chr11:47092682 | C/T | 8.86E-7 | 287 | 25.57 | 31.57 | 12.63 | KM Plot |
| KIRP | rs61896125 | chr11:47097298 | C/T | 8.86E-7 | 287 | 25.57 | 31.57 | 12.63 | KM Plot |
| KIRP | rs61896126 | chr11:47099167 | T/G | 1.01E-11 | 286 | 25.4 | 29.8 | 10.82 | KM Plot |